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BP_AACOMP(1)	      User Contributed Perl Documentation	  BP_AACOMP(1)

NAME
       aacomp - amino acid composition of protein sequences

SYNOPSIS
	 aacomp [-f/--format FORMAT] [-h/--help] filename
	 or
	 aacomp [-f/--format FORMAT] < filename
	 or
	 aacomp [-f/--format FORMAT] -i filename

DESCRIPTION
       This scripts prints out the count of amino acids over all protein
       sequences from the input file.

OPTIONS
       The default sequence format is fasta.

       The sequence input can be provided using any of the three methods:

       unnamed argument
	    aacomp filename

       named argument
	    aacomp -i filename

       standard input
	    aacomp < filename

FEEDBACK
   Mailing Lists
       User feedback is an integral part of the evolution of this and other
       Bioperl modules. Send your comments and suggestions preferably to the
       Bioperl mailing list.  Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About the mailing lists

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of
       the bugs and their resolution. Bug reports can be submitted via the
       web:

	 http://bugzilla.open-bio.org/

AUTHOR - Jason Stajich
       Email jason@bioperl.org

HISTORY
       Based on aacomp.c from an old version of EMBOSS

perl v5.14.1			  2011-07-22			  BP_AACOMP(1)

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